Package: transPlotR 0.0.5

transPlotR: Visualize Transcript Structures in Elegant Way

To visualize the gene structure with multiple isoforms better, I developed this package to draw different transcript structures easily.

Authors:Jun Zhang [aut, cre]

transPlotR_0.0.5.tar.gz
transPlotR_0.0.5.zip(r-4.7)transPlotR_0.0.5.zip(r-4.6)transPlotR_0.0.5.zip(r-4.5)
transPlotR_0.0.5.tgz(r-4.6-any)transPlotR_0.0.5.tgz(r-4.5-any)
transPlotR_0.0.5.tar.gz(r-4.7-any)transPlotR_0.0.5.tar.gz(r-4.6-any)
transPlotR_0.0.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
transPlotR/json (API)

# Install 'transPlotR' in R:
install.packages('transPlotR', repos = c('https://junjunlab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/junjunlab/transplotr/issues

Datasets:
  • gtf - This is a test data for this package test data describtion

On CRAN:

Conda:

bedbigwiggenelinkvistranscriptvisualization

5.43 score 82 stars 66 scripts 202 downloads 7 exports 146 dependencies

Last updated from:f77b061104. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK192
source / vignettesOK322
linux-release-x86_64OK193
macos-release-arm64OK159
macos-oldrel-arm64OK347
windows-develOK197
windows-releaseOK146
windows-oldrelOK178
wasm-releaseOK171

Exports:%>%bedViscalcuRotatedCoordlinkVisloadBigWigtrackVistrancriptVis

Dependencies:abindaskpassbackportsbase64encBHBiobaseBiocBaseUtilsBiocGenericsBiocIOBiocParallelBiostringsbitbit64bitopsblobbroombslibcachemcallrcellrangercigarilloclicliprcodetoolsconflictedcowplotcpp11crayoncurldata.tableDBIdbplyrDelayedArraydigestdplyrdtplyrevaluatefarverfastmapfontawesomeforcatsformatRfsfurrrfutile.loggerfutile.optionsfuturegarglegenericsGenomicAlignmentsGenomicRangesgeomtextpathggarcheryggh4xggnewscaleggplot2globalsgluegoogledrivegooglesheets4gtablehavenhighrhmshtmltoolshttridsIRangesisobandjquerylibjsonliteknitrlabelinglambda.rlatticelifecyclelistenvlubridatemagrittrMatrixMatrixGenericsmatrixStatsmemoisemimemodelropensslparallellypillarpkgconfigprettyunitsprocessxprogresspspurrrR6raggrappdirsRColorBrewerRCurlreadrreadxlrematchrematch2reprexrestfulrRhtslibrjsonrlangrmarkdownRsamtoolsrstudioapirtracklayerrvestS4ArraysS4VectorsS7sassscalesselectrSeqinfosnowSparseArraystringistringrSummarizedExperimentsyssystemfontstextshapingtibbletidyrtidyselecttidyversetimechangetinytextzdbutf8uuidvctrsviridisLitevroomwithrxfunXMLxml2XVectoryaml