Package: transPlotR 0.0.5

transPlotR: Visualize Transcript Structures in Elegant Way

To visualize the gene structure with multiple isoforms better, I developed this package to draw different transcript structures easily.

Authors:Jun Zhang [aut, cre]

transPlotR_0.0.5.tar.gz
transPlotR_0.0.5.zip(r-4.5)transPlotR_0.0.5.zip(r-4.4)transPlotR_0.0.5.zip(r-4.3)
transPlotR_0.0.5.tgz(r-4.4-any)transPlotR_0.0.5.tgz(r-4.3-any)
transPlotR_0.0.5.tar.gz(r-4.5-noble)transPlotR_0.0.5.tar.gz(r-4.4-noble)
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transPlotR.pdf |transPlotR.html✨
transPlotR/json (API)

Peer review:

Bug tracker:https://github.com/junjunlab/transplotr/issues

On CRAN:

bedbigwiggenelinkvistranscriptvisualization

7 exports 69 stars 3.52 score 152 dependencies 58 scripts 168 downloads

Last updated 1 years agofrom:f77b061104. Checks:OK: 7. Indexed: yes.

Exports:%>%bedViscalcuRotatedCoordlinkVisloadBigWigtrackVistrancriptVis

Dependencies:abindaskpassbackportsbase64encBHBiobaseBiocGenericsBiocIOBiocParallelBiostringsbitbit64bitopsblobbroombslibcachemcallrcellrangerclicliprcodetoolscolorspaceconflictedcowplotcpp11crayoncurldata.tableDBIdbplyrDelayedArraydigestdplyrdtplyrevaluatefansifarverfastmapfontawesomeforcatsformatRfsfurrrfutile.loggerfutile.optionsfuturegarglegenericsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicRangesgeomtextpathggarcheryggh4xggnewscaleggplot2globalsgluegoogledrivegooglesheets4gtablehavenhighrhmshtmltoolshttridsIRangesisobandjquerylibjsonliteknitrlabelinglambda.rlatticelifecyclelistenvlubridatemagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemgcvmimemodelrmunsellnlmeopensslparallellypillarpkgconfigprettyunitsprocessxprogresspspurrrR6raggrappdirsRColorBrewerRCurlreadrreadxlrematchrematch2reprexrestfulrRhtslibrjsonrlangrmarkdownRsamtoolsrstudioapirtracklayerrvestS4ArraysS4VectorssassscalesselectrsnowSparseArraystringistringrSummarizedExperimentsyssystemfontstextshapingtibbletidyrtidyselecttidyversetimechangetinytextzdbUCSC.utilsutf8uuidvctrsviridisLitevroomwithrxfunXMLxml2XVectoryamlzlibbioc