Package: transPlotR 0.0.5

transPlotR: Visualize Transcript Structures in Elegant Way

To visualize the gene structure with multiple isoforms better, I developed this package to draw different transcript structures easily.

Authors:Jun Zhang [aut, cre]

transPlotR_0.0.5.tar.gz
transPlotR_0.0.5.zip(r-4.7-any)transPlotR_0.0.5.zip(r-4.6-any)transPlotR_0.0.5.zip(r-4.5-any)
transPlotR_0.0.5.tgz(r-4.6-any)transPlotR_0.0.5.tgz(r-4.5-any)
transPlotR_0.0.5.tar.gz(r-4.7-any)transPlotR_0.0.5.tar.gz(r-4.6-any)
transPlotR_0.0.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
transPlotR/json (API)

# Install 'transPlotR' in R:
install.packages('transPlotR', repos = c('https://junjunlab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/junjunlab/transplotr/issues

Datasets:
  • gtf - This is a test data for this package test data describtion

On CRAN:

Conda:

bedbigwiggenelinkvistranscriptvisualization

5.41 score 84 stars 61 scripts 212 downloads 7 exports 137 dependencies

Last updated from:f77b061104. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK181
source / vignettesOK231
linux-releaseOK162
macos-releaseOK167
macos-oldrelOK190
windows-develOK129
windows-releaseOK107
windows-oldrelOK112
wasm-releaseOK183

Exports:%>%bedViscalcuRotatedCoordlinkVisloadBigWigtrackVistrancriptVis

Dependencies:askpassbackportsbase64encBHBiocBaseUtilsBiocGenericsBiocIOBiocParallelBiostringsbitbit64bitopsblobbroombslibcachemcallrcellrangercigarilloclicliprcodetoolsconflictedcowplotcpp11crayoncurldata.tableDBIdbplyrdigestdplyrdtplyrevaluatefarverfastmapfontawesomeforcatsformatRfsfurrrfutile.loggerfutile.optionsfuturegarglegenericsGenomicAlignmentsGenomicRangesgeomtextpathggarcheryggh4xggnewscaleggplot2globalsgluegoogledrivegooglesheets4gtablehavenhighrhmshtmltoolshttridsIRangesisobandjquerylibjsonliteknitrlabelinglambda.rlifecyclelistenvlubridatemagrittrmemoisemimemodelropensslotelparallellypillarpkgconfigprettyunitsprocessxprogresspspurrrR6raggrappdirsRColorBrewerRCurlreadrreadxlrematchrematch2reprexrestfulrRhtslibrjsonrlangrmarkdownRsamtoolsrstudioapirtracklayerrvestS4VectorsS7sassscalesselectrSeqinfosnowstringistringrsyssystemfontstextshapingtibbletidyrtidyselecttidyversetimechangetinytextzdbutf8uuidvctrsviridisLitevroomwithrxfunXMLxml2XVectoryaml