ClusterGVis - One-Step to Cluster and Visualize Gene Expression Data
Provides a streamlined workflow for clustering and visualizing gene expression patterns, particularly from time-series RNA-Seq and single-cell experiments. The package is designed to integrate seamlessly within the Bioconductor ecosystem by operating directly on standard data classes such as `SummarizedExperiment` and `SingleCellExperiment`. It implements common clustering algorithms (e.g., k-means, fuzzy c-means) and generates a suite of publication-ready visualizations to explore co-expressed gene modules. Functions are also included to facilitate the visualization of clustering results derived from other popular tools.
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rnaseqtranscriptomicsvisualizationsinglecellgeneexpressionclusteringcomplexheatmapgene-clusteringgene-expressionmfuzz
8.49 score 376 stars 68 scripts 157 downloadstransPlotR - Visualize Transcript Structures in Elegant Way
To visualize the gene structure with multiple isoforms better, I developed this package to draw different transcript structures easily.
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bedbigwiggenelinkvistranscriptvisualization
5.43 score 82 stars 66 scripts 202 downloads