Package: GseaVis 0.1.1

GseaVis: Implement for 'GSEA' Enrichment Visualization

Mark your interesting genes on plot and support more parameters to handle your own gene set enrichment analysis plot.

Authors:Jun Zhang [aut, cre], Guangchuang Yu [ctb]

GseaVis_0.1.1.tar.gz
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GseaVis.pdf |GseaVis.html✨
GseaVis/json (API)

# Install 'GseaVis' in R:
install.packages('GseaVis', repos = c('https://junjunlab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/junjunlab/gseavis/issues

Datasets:
  • intergrated - This is a test data for this package test data describtion

On CRAN:

6.59 score 144 stars 54 scripts 484 downloads 13 exports 139 dependencies

Last updated 1 months agofrom:a3f93bd87b. Checks:1 OK, 5 WARNING, 2 FAILURE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 11 2025
R-4.5-winWARNINGFeb 11 2025
R-4.5-macWARNINGFeb 11 2025
R-4.5-linuxWARNINGFeb 11 2025
R-4.4-winWARNINGFeb 11 2025
R-4.4-macWARNINGFeb 11 2025
R-4.3-winOUTDATEDDec 17 2024
R-4.3-macOUTDATEDDec 17 2024

Exports:%>%circGseadfGO2gseaResultdfKEGG2gseaResultdotplotGseaenrich_ridge_plotGSEAmultiGPgseaNbgsInfogsInfoNewreadGseaFilesankeyGoPlotvolcanoGsea

Dependencies:abindAnnotationDbiapeaplotaskpassBHBiobaseBiocGenericsBiocParallelBiostringsbitbit64blobcachemcirclizeclicliprclusterProfilercodetoolscolorspacecols4allcowplotcpp11crayoncurldata.tableDBIdigestDOSEdplyrenrichplotfansifarverfastmapfastmatchfgseaforcatsformatRfsfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataggforceggfunggnewscaleggplot2ggplotifyggppggrepelggridgesggsankeyggsciggtangleggtreeGlobalOptionsglueGO.dbGOSemSimgridExtragridGraphicsgsongtablehmshttrigraphIRangesisobandjsonliteKEGGRESTlabelinglambda.rlatticelazyevallifecycleloggerlubridatemagrittrMASSMatrixmemoisemgcvmimemunsellnlmeopensslpatchworkpillarpkgconfigplogrplyrpngpolyclippolynomprettyunitsprogresspurrrqvalueR.methodsS3R.ooR.utilsR6RColorBrewerRcppRcppEigenreadrreshape2rlangRSQLiteS4VectorsscalesscatterpieshapesnowspacesXYZstringdiststringistringrsyssystemfontstibbletidyrtidyselecttidytreetimechangetreeiotweenrtzdbUCSC.utilsutf8vctrsviridisLitevroomwithrxtsXVectoryulab.utilszoo